Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT19994Leucine-rich repeat-containing protein 15. (513 aa)    
Predicted Functional Partners:
KP79_PYT25912
Leucine-rich repeat serine/threonine-protein kinase 1.
  
 
 0.600
KP79_PYT15130
Leucine-rich repeat-containing protein 28.
  
 
  0.538
KP79_PYT18050
Leucine-rich repeat-containing G-protein coupled receptor 4.
  
 
  0.537
KP79_PYT09957
Protein lap4.
  
     0.533
KP79_PYT26228
Leucine-rich repeat protein SHOC-2.
  
     0.533
KP79_PYT10039
Leucine-rich repeat-containing protein 57.
  
   
 0.530
KP79_PYT08949
Malignant fibrous histiocytoma-amplified sequence 1-like.
  
     0.526
KP79_PYT06240
Leucine-rich repeat-containing protein 20.
  
     0.525
KP79_PYT06241
Leucine-rich repeat-containing protein 20.
  
     0.521
KP79_PYT14594
Leucine-rich repeat-containing protein 69.
  
     0.512
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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