STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT04481Thyrotroph embryonic factor. (271 aa)    
Predicted Functional Partners:
KP79_PYT14753
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.633
KP79_PYT08306
Nuclear factor interleukin-3-regulated protein.
    
 
0.560
KP79_PYT15877
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.553
KP79_PYT10425
DUF4706 domain-containing protein.
   
 0.539
KP79_PYT08605
Cytochrome c oxidase subunit 5B, mitochondrial.
   
 0.539
KP79_PYT13976
Cytochrome c oxidase subunit 4 isoform 2, mitochondrial.
   
 0.522
KP79_PYT05296
Cyclic AMP-dependent transcription factor ATF-4.
   
 0.513
KP79_PYT08845
Uncharacterized protein C19orf43.
   
 0.481
KP79_PYT05845
Cytochrome c oxidase subunit 6B1.
   
 0.481
KP79_PYT24074
Cytochrome b-c1 complex subunit 7.
   
 0.428
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.