Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT09887B9 domain-containing protein 2. (175 aa)    
Predicted Functional Partners:
KP79_PYT16825
Meckel syndrome type 1 protein.
    
0.997
KP79_PYT05362
B9 domain-containing protein 1.
   
0.997
KP79_PYT13662
Transmembrane protein 231.
   
 
 0.986
KP79_PYT08964
Coiled-coil and C2 domain-containing protein 2A.
    
 0.966
KP79_PYT07816
Transmembrane protein 216.
     
 0.931
KP79_PYT08741
Jouberin.
    
 0.867
KP79_PYT21842
Transmembrane protein 107.
     
 0.861
KP79_PYT21360
Nephrocystin-4.
      
 0.813
KP79_PYT10006
Nephrocystin-1.
      
 0.798
KP79_PYT06693
CEP209_CC5 domain-containing protein.
   
  
 0.768
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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