KP79_PYT06932 protein (Mizuhopecten yessoensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KP79_PYT06932

Iron-sulfur cluster assembly enzyme ISCU, mitochondrial; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. (153 aa)

Predicted Functional Partners:

KP79_PYT13624

0.998

KP79_PYT08524

0.945

KP79_PYT10113

0.945

KP79_PYT21448

0.932

KP79_PYT07396

0.927

KP79_PYT09269

0.926

KP79_PYT04749

0.915

KP79_PYT21400

0.915

KP79_PYT07106

0.915

KP79_PYT07105

0.915

Your Current Organism:

Mizuhopecten yessoensis

NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KP79_PYT04749	KP79_PYT06932	A0A210PLN7	A0A210PW70	Isopenicillin N epimerase.	Iron-sulfur cluster assembly enzyme ISCU, mitochondrial; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	0.915
KP79_PYT04749	KP79_PYT07396	A0A210PLN7	A0A210PM15	Isopenicillin N epimerase.	Adrenodoxin, mitochondrial.	0.650
KP79_PYT04749	KP79_PYT08524	A0A210PLN7	A0A210PEB8	Isopenicillin N epimerase.	Iron-sulfur cluster assembly 1-like.	0.561
KP79_PYT04749	KP79_PYT09269	A0A210PLN7	A0A210PMH6	Isopenicillin N epimerase.	Adrenodoxin-like protein, mitochondrial.	0.650
KP79_PYT04749	KP79_PYT10113	A0A210PLN7	A0A210QE09	Isopenicillin N epimerase.	Iron-sulfur cluster assembly 2-like.	0.559
KP79_PYT06932	KP79_PYT04749	A0A210PW70	A0A210PLN7	Iron-sulfur cluster assembly enzyme ISCU, mitochondrial; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	Isopenicillin N epimerase.	0.915
KP79_PYT06932	KP79_PYT07105	A0A210PW70	A0A210QDP5	Iron-sulfur cluster assembly enzyme ISCU, mitochondrial; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	Aminotransferase.	0.915
KP79_PYT06932	KP79_PYT07106	A0A210PW70	A0A210QDM9	Iron-sulfur cluster assembly enzyme ISCU, mitochondrial; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	Aminotransferase.	0.915
KP79_PYT06932	KP79_PYT07396	A0A210PW70	A0A210PM15	Iron-sulfur cluster assembly enzyme ISCU, mitochondrial; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	Adrenodoxin, mitochondrial.	0.927
KP79_PYT06932	KP79_PYT08524	A0A210PW70	A0A210PEB8	Iron-sulfur cluster assembly enzyme ISCU, mitochondrial; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	Iron-sulfur cluster assembly 1-like.	0.945
KP79_PYT06932	KP79_PYT09269	A0A210PW70	A0A210PMH6	Iron-sulfur cluster assembly enzyme ISCU, mitochondrial; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	Adrenodoxin-like protein, mitochondrial.	0.926
KP79_PYT06932	KP79_PYT10113	A0A210PW70	A0A210QE09	Iron-sulfur cluster assembly enzyme ISCU, mitochondrial; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	Iron-sulfur cluster assembly 2-like.	0.945
KP79_PYT06932	KP79_PYT13624	A0A210PW70	A0A210QXR5	Iron-sulfur cluster assembly enzyme ISCU, mitochondrial; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	Cysteine desulfurase, mitochondrial.	0.998
KP79_PYT06932	KP79_PYT21400	A0A210PW70	A0A210PXK1	Iron-sulfur cluster assembly enzyme ISCU, mitochondrial; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	Uncharacterized protein.	0.915
KP79_PYT06932	KP79_PYT21448	A0A210PW70	A0A210PXQ8	Iron-sulfur cluster assembly enzyme ISCU, mitochondrial; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	Selenocysteine lyase.	0.932
KP79_PYT07105	KP79_PYT06932	A0A210QDP5	A0A210PW70	Aminotransferase.	Iron-sulfur cluster assembly enzyme ISCU, mitochondrial; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	0.915
KP79_PYT07105	KP79_PYT07396	A0A210QDP5	A0A210PM15	Aminotransferase.	Adrenodoxin, mitochondrial.	0.650
KP79_PYT07105	KP79_PYT08524	A0A210QDP5	A0A210PEB8	Aminotransferase.	Iron-sulfur cluster assembly 1-like.	0.561
KP79_PYT07105	KP79_PYT09269	A0A210QDP5	A0A210PMH6	Aminotransferase.	Adrenodoxin-like protein, mitochondrial.	0.650
KP79_PYT07105	KP79_PYT10113	A0A210QDP5	A0A210QE09	Aminotransferase.	Iron-sulfur cluster assembly 2-like.	0.559

page 1 of 4

Server load: low (20%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2024

Credits

Access

Info

About