Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KP79_PYT19147Protein boule-like. (386 aa)    
Predicted Functional Partners:
KP79_PYT24524
Ubiquitin-like modifier-activating enzyme 5.
    
   0.932
KP79_PYT12361
CCR4-NOT transcription complex subunit 7.
    
 0.803
KP79_PYT22825
Cytoplasmic polyadenylation element-binding protein 1.
   
 
 0.620
KP79_PYT13823
Negative elongation factor C/D.
    
 0.584
KP79_PYT24093
Heterogeneous nuclear ribonucleoprotein L.
    
 0.580
KP79_PYT11178
Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.
   
 
 0.576
KP79_PYT23763
Zinc finger protein 346.
    
   0.564
KP79_PYT05020
DAZ-associated protein 2.
    
 
 0.555
KP79_PYT12938
Transcription factor IIIA.
    
 
 0.523
KP79_PYT15863
Spermatogenesis-associated protein 22.
      
 0.514
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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