KP79_PYT19145 protein (Mizuhopecten yessoensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

KP79_PYT19145

Protein disulfide-isomerase. (623 aa)

Predicted Functional Partners:

KP79_PYT23722

0.966

KP79_PYT24061

0.958

KP79_PYT04054

0.953

KP79_PYT08590

0.943

KP79_PYT14482

0.937

KP79_PYT04055

0.936

KP79_PYT02072

0.927

KP79_PYT13005

0.908

KP79_PYT05628

0.900

KP79_PYT09889

0.884

Your Current Organism:

Mizuhopecten yessoensis

NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KP79_PYT02072	KP79_PYT05628	A0A210Q0W1	A0A210QSX6	Endoplasmic reticulum resident protein 29.	Protein disulfide-isomerase.	0.927
KP79_PYT02072	KP79_PYT08590	A0A210Q0W1	A0A210Q2J4	Endoplasmic reticulum resident protein 29.	Calreticulin.	0.404
KP79_PYT02072	KP79_PYT14482	A0A210Q0W1	A0A210QHH3	Endoplasmic reticulum resident protein 29.	Protein disulfide-isomerase like 2-1.	0.904
KP79_PYT02072	KP79_PYT19145	A0A210Q0W1	A0A210PWA6	Endoplasmic reticulum resident protein 29.	Protein disulfide-isomerase.	0.927
KP79_PYT02072	KP79_PYT23722	A0A210Q0W1	A0A210QSG8	Endoplasmic reticulum resident protein 29.	Protein disulfide-isomerase A6; Belongs to the protein disulfide isomerase family.	0.937
KP79_PYT02072	KP79_PYT24061	A0A210Q0W1	A0A210QYN6	Endoplasmic reticulum resident protein 29.	Thioredoxin domain-containing protein 5; Belongs to the protein disulfide isomerase family.	0.920
KP79_PYT04054	KP79_PYT04055	A0A210QV22	A0A210QV24	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.	0.901
KP79_PYT04054	KP79_PYT05628	A0A210QV22	A0A210QSX6	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.	Protein disulfide-isomerase.	0.913
KP79_PYT04054	KP79_PYT08590	A0A210QV22	A0A210Q2J4	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.	Calreticulin.	0.952
KP79_PYT04054	KP79_PYT09889	A0A210QV22	A0A210PVY9	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.	ERO1-like protein beta.	0.785
KP79_PYT04054	KP79_PYT13005	A0A210QV22	A0A210QC09	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.	Calnexin.	0.945
KP79_PYT04054	KP79_PYT14482	A0A210QV22	A0A210QHH3	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.	Protein disulfide-isomerase like 2-1.	0.508
KP79_PYT04054	KP79_PYT19145	A0A210QV22	A0A210PWA6	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.	Protein disulfide-isomerase.	0.953
KP79_PYT04054	KP79_PYT23722	A0A210QV22	A0A210QSG8	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.	Protein disulfide-isomerase A6; Belongs to the protein disulfide isomerase family.	0.971
KP79_PYT04054	KP79_PYT24061	A0A210QV22	A0A210QYN6	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.	Thioredoxin domain-containing protein 5; Belongs to the protein disulfide isomerase family.	0.789
KP79_PYT04055	KP79_PYT04054	A0A210QV24	A0A210QV22	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.	0.901
KP79_PYT04055	KP79_PYT05628	A0A210QV24	A0A210QSX6	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.	Protein disulfide-isomerase.	0.913
KP79_PYT04055	KP79_PYT08590	A0A210QV24	A0A210Q2J4	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.	Calreticulin.	0.964
KP79_PYT04055	KP79_PYT09889	A0A210QV24	A0A210PVY9	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.	ERO1-like protein beta.	0.785
KP79_PYT04055	KP79_PYT13005	A0A210QV24	A0A210QC09	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.	Calnexin.	0.945