Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KP79_PYT25083Uncharacterized protein. (135 aa)    
Predicted Functional Partners:
KP79_PYT24074
Cytochrome b-c1 complex subunit 7.
   
 0.841
KP79_PYT05726
Cytochrome b-c1 complex subunit 2, mitochondrial.
   
 0.830
KP79_PYT11475
Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.
   
 0.805
KP79_PYT01330
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 0.627
KP79_PYT13976
Cytochrome c oxidase subunit 4 isoform 2, mitochondrial.
   
 0.591
KP79_PYT04214
Mitochondrial-processing peptidase subunit alpha; Belongs to the peptidase M16 family.
   
 0.558
KP79_PYT14753
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.554
KP79_PYT23761
BAG family molecular chaperone regulator 4.
    
 
 0.548
KP79_PYT08845
Uncharacterized protein C19orf43.
   
 0.513
KP79_PYT05845
Cytochrome c oxidase subunit 6B1.
   
 0.513
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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