Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT13368Uncharacterized protein. (416 aa)    
Predicted Functional Partners:
KP79_PYT19793
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1.
   
 0.945
KP79_PYT18339
Actin-like protein 6B; Belongs to the actin family.
   
 0.942
KP79_PYT04469
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1.
   
 0.939
KP79_PYT11772
Protein polybromo-1.
   
 0.919
KP79_PYT07888
Trithorax group protein osa.
   
 0.900
KP79_PYT05104
Zinc finger protein DPF3.
   
 0.875
KP79_PYT10326
PHD finger protein 10.
    
 0.874
KP79_PYT08861
Histone H2A deubiquitinase MYSM1.
   
 0.863
KP79_PYT04182
SWI/SNF complex subunit SMARCC2.
   
 0.854
KP79_PYT07298
ARID domain-containing protein C08B11.3.
    
 0.842
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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