Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT13371Ganglioside-induced differentiation-associated protein 1. (337 aa)    
Predicted Functional Partners:
KP79_PYT17903
Peroxisomal membrane protein PEX16.
     
 0.818
KP79_PYT22422
Peroxisomal biogenesis factor 19.
     
 0.817
KP79_PYT11773
ATP-binding cassette sub-family D member 2.
     
 0.772
KP79_PYT04134
Acyl-CoA-binding domain-containing protein 5.
     
 0.760
KP79_PYT21541
Mitofusin-2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 
 0.737
KP79_PYT13774
mRNA cap guanine-N7 methyltransferase.
      
 0.736
KP79_PYT24696
Trafficking kinesin-binding protein 1.
   
  
 0.730
KP79_PYT02232
Growth hormone-inducible transmembrane protein; Belongs to the BI1 family.
      
 0.709
KP79_PYT08625
Peroxisomal membrane protein PEX13.
     
 0.707
KP79_PYT16372
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.702
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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