STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT09237Something about silencing protein 10. (512 aa)    
Predicted Functional Partners:
KP79_PYT18405
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.999
KP79_PYT04718
WD repeat-containing protein 46.
   
 0.999
KP79_PYT06820
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.999
KP79_PYT06750
U3 small nucleolar RNA-associated protein 14-like B.
   
 0.999
KP79_PYT15363
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
 
 0.999
KP79_PYT17033
Nucleolar protein 14.
   
 0.999
KP79_PYT23670
Bystin.
   
 
 0.998
KP79_PYT05734
Ribosome biogenesis protein BMS1-like.
   
 
 0.998
KP79_PYT00333
U3 small nucleolar RNA-associated protein 18-like.
   
 0.998
KP79_PYT16121
Nucleolar complex protein 4-like B.
   
  0.997
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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