Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT22717Protein couch potato. (347 aa)    
Predicted Functional Partners:
KP79_PYT13722
Epithelial splicing regulatory protein 1.
    
 
 0.788
KP79_PYT08946
KH domain-containing, RNA-binding, signal transduction-associated protein 3.
    
 
 0.634
KP79_PYT07609
Protein held out wing.
    
 
 0.634
KP79_PYT22077
Uncharacterized protein.
    
 
 0.634
KP79_PYT00140
ELAV-like protein 2.
    
 
 0.515
KP79_PYT12813
Protein Red.
      
 0.482
KP79_PYT01915
Disco-interacting protein 2-like C.
      
 0.472
KP79_PYT24026
RNA-binding protein 38.
      
 0.466
KP79_PYT05595
Homeobox protein.
    
   0.459
KP79_PYT19932
WD repeat-containing protein 44.
      
 0.452
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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