Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
KP79_PYT15963RNA-binding protein Musashi-like 2. (453 aa)    
Predicted Functional Partners:
KP79_PYT10320
Zinc finger CCCH domain-containing protein 14.
    
 
 0.811
KP79_PYT09630
Serine/arginine-rich splicing factor 4.
  
 0.798
KP79_PYT07159
Cleavage stimulation factor subunit 2.
  
 
 0.783
KP79_PYT15872
Ran-specific GTPase-activating protein.
   
  
 0.733
KP79_PYT09159
Transportin-1.
   
 
 0.730
KP79_PYT16723
E3 ubiquitin-protein ligase.
      
 0.690
KP79_PYT06212
Cleavage and polyadenylation specificity factor subunit 4.
    
 
 0.686
SOXB2
Transcription factor Sox-14.
    
 
 0.685
KP79_PYT09616
RNA-binding protein Nova-1.
    
 
 0.652
KP79_PYT15131
Regulator of nonsense transcripts 1.
   
 
 0.614
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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