STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT16001Thioredoxin-like_fold domain-containing protein. (254 aa)    
Predicted Functional Partners:
KP79_PYT17386
Ribonuclease P protein subunit p30.
    
 0.826
KP79_PYT14161
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
    
 0.801
KP79_PYT05381
Ribonuclease P protein subunit p21.
   
 0.786
KP79_PYT20685
Ribonuclease P protein subunit p38.
   
 0.665
KP79_PYT06432
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.665
KP79_PYT24769
Ribonucleases P/MRP protein subunit POP1.
    
 0.638
KP79_PYT08553
Ribonucleases P/MRP protein subunit POP1.
    
 0.638
KP79_PYT14306
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
     
 0.619
KP79_PYT10245
Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences.
    
 0.618
KP79_PYT06049
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
 
  0.613
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.