Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
KP79_PYT16023Lysine-specific demethylase 2B. (1382 aa)    
Predicted Functional Partners:
KP79_PYT05659
E3 ubiquitin-protein ligase RING2.
    
 
 0.977
KP79_PYT24812
S-phase kinase-associated protein 1.
    
 0.973
KP79_PYT18317
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.973
KP79_PYT15560
Postreplication repair E3 ubiquitin-protein ligase RAD18.
    
 
 0.920
KP79_PYT20855
Uncharacterized protein.
    
 0.909
KP79_PYT09158
Uncharacterized protein.
    
 0.895
KP79_PYT20164
Lysine-specific demethylase 6A.
   
 0.895
KP79_PYT20485
BCL-6 corepressor-like protein 1.
    
 0.885
KP79_PYT17751
Polycomb group RING finger protein 3.
   
 0.874
KP79_PYT05021
Cullin-1; Belongs to the cullin family.
    
 0.869
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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