Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KP79_PYT02233Bifunctional arginine demethylase and lysyl-hydroxylase PSR. (330 aa)    
Predicted Functional Partners:
KP79_PYT09935
Barrier-to-autointegration factor A.
    
 0.842
KP79_PYT08137
Protein LTV1-like.
    
 0.670
KP79_PYT15283
Serine/threonine-protein kinase RIO2.
   
 0.665
KP79_PYT23670
Bystin.
    
 0.655
KP79_PYT10880
Pre-rRNA-processing protein TSR1-like.
    
 0.649
KP79_PYT14306
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
    
 0.615
KP79_PYT12227
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.581
KP79_PYT21748
Period circadian protein.
    
 0.545
KP79_PYT23830
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
 0.531
KP79_PYT09651
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.526
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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