Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT17103Uncharacterized protein. (325 aa)    
Predicted Functional Partners:
KP79_PYT12090
Uncharacterized protein.
      
 0.713
KP79_PYT09569
T-complex-associated testis-expressed protein 1.
      
 0.680
KP79_PYT18159
PHD finger protein 13.
    
 0.629
KP79_PYT14173
Epimerase family protein SDR39U1.
      
 0.622
KP79_PYT10628
Protein lin-52-like.
    
 0.620
KP79_PYT05999
Protein lin-54-like.
    
 0.605
KP79_PYT18642
Coiled-coil domain-containing protein 79.
      
 0.563
KP79_PYT07913
Histone-binding protein RBBP7.
    
 0.539
KP79_PYT16583
Coiled-coil domain-containing protein C16orf93-like.
      
 0.514
KP79_PYT09538
Fanconi anemia group M protein.
    
 0.511
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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