Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KP79_PYT07776DENN domain-containing protein 5B. (1330 aa)    
Predicted Functional Partners:
KP79_PYT17036
Ras-related protein Rab-28.
     
 0.703
KP79_PYT13703
T-cell immunomodulatory protein.
      
 0.698
KP79_PYT12169
DENN domain-containing protein 3.
    
 
 0.633
KP79_PYT06730
Transmembrane protein 9.
      
 0.615
KP79_PYT05794
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2.
 
      0.613
KP79_PYT14878
C-myc promoter-binding protein.
    
 
 0.613
KP79_PYT21787
Zinc finger matrin-type protein 3.
   
  
 0.609
KP79_PYT20147
Ras-related protein Rab-6A.
    
 
 0.585
KP79_PYT17866
MAP kinase-activating death domain protein.
    
 
 0.563
KP79_PYT19020
Late secretory pathway protein AVL9-like.
      
 0.556
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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