STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT17367Synaptic vesicular amine transporter. (532 aa)    
Predicted Functional Partners:
KP79_PYT07474
Synaptotagmin-1.
     
 0.737
KP79_PYT23711
Regulating synaptic membrane exocytosis protein 2.
     
 0.722
KP79_PYT15823
Uncharacterized protein.
     
 0.722
KP79_PYT03097
Choline O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family.
 
 
  
 0.721
KP79_PYT17921
Vesicle-associated membrane protein 727.
   
 
 0.710
KP79_PYT16228
Syntaxin; Belongs to the syntaxin family.
     
 0.705
KP79_PYT20122
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
     
 0.685
KP79_PYT15440
Protein unc-13-like B.
     
 0.684
KP79_PYT04560
Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.667
KP79_PYT09694
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
     
 0.659
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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