Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KP79_PYT02111 | KP79_PYT04683 | A0A210PZC1 | A0A210PLZ0 | WD repeat-containing protein 43. | tRNA pseudouridine synthase 2. | 0.469 |
KP79_PYT02111 | KP79_PYT05734 | A0A210PZC1 | A0A210QM62 | WD repeat-containing protein 43. | Ribosome biogenesis protein BMS1-like. | 0.998 |
KP79_PYT02111 | KP79_PYT06432 | A0A210PZC1 | A0A210R4K1 | WD repeat-containing protein 43. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.984 |
KP79_PYT02111 | KP79_PYT08860 | A0A210PZC1 | A0A210PNP6 | WD repeat-containing protein 43. | HEAT repeat-containing protein 1. | 0.999 |
KP79_PYT02111 | KP79_PYT11091 | A0A210PZC1 | A0A210Q162 | WD repeat-containing protein 43. | U3 small nucleolar RNA-interacting protein 2. | 0.996 |
KP79_PYT02111 | KP79_PYT15327 | A0A210PZC1 | A0A210QYY6 | WD repeat-containing protein 43. | U3 small nucleolar RNA-associated protein 15-like. | 0.999 |
KP79_PYT02111 | KP79_PYT17356 | A0A210PZC1 | A0A210PYA9 | WD repeat-containing protein 43. | Nucleolar protein 56. | 0.998 |
KP79_PYT02111 | KP79_PYT18744 | A0A210PZC1 | A0A210Q3L6 | WD repeat-containing protein 43. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.992 |
KP79_PYT02111 | KP79_PYT22089 | A0A210PZC1 | A0A210PUD3 | WD repeat-containing protein 43. | rRNA 2'-O-methyltransferase fibrillarin. | 0.994 |
KP79_PYT02111 | KP79_PYT24573 | A0A210PZC1 | A0A210PG07 | WD repeat-containing protein 43. | Nucleolar protein 58. | 0.999 |
KP79_PYT04683 | KP79_PYT02111 | A0A210PLZ0 | A0A210PZC1 | tRNA pseudouridine synthase 2. | WD repeat-containing protein 43. | 0.469 |
KP79_PYT04683 | KP79_PYT05734 | A0A210PLZ0 | A0A210QM62 | tRNA pseudouridine synthase 2. | Ribosome biogenesis protein BMS1-like. | 0.620 |
KP79_PYT04683 | KP79_PYT06432 | A0A210PLZ0 | A0A210R4K1 | tRNA pseudouridine synthase 2. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.823 |
KP79_PYT04683 | KP79_PYT08860 | A0A210PLZ0 | A0A210PNP6 | tRNA pseudouridine synthase 2. | HEAT repeat-containing protein 1. | 0.556 |
KP79_PYT04683 | KP79_PYT11091 | A0A210PLZ0 | A0A210Q162 | tRNA pseudouridine synthase 2. | U3 small nucleolar RNA-interacting protein 2. | 0.477 |
KP79_PYT04683 | KP79_PYT15327 | A0A210PLZ0 | A0A210QYY6 | tRNA pseudouridine synthase 2. | U3 small nucleolar RNA-associated protein 15-like. | 0.468 |
KP79_PYT04683 | KP79_PYT17356 | A0A210PLZ0 | A0A210PYA9 | tRNA pseudouridine synthase 2. | Nucleolar protein 56. | 0.998 |
KP79_PYT04683 | KP79_PYT18744 | A0A210PLZ0 | A0A210Q3L6 | tRNA pseudouridine synthase 2. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.919 |
KP79_PYT04683 | KP79_PYT22089 | A0A210PLZ0 | A0A210PUD3 | tRNA pseudouridine synthase 2. | rRNA 2'-O-methyltransferase fibrillarin. | 0.990 |
KP79_PYT04683 | KP79_PYT24573 | A0A210PLZ0 | A0A210PG07 | tRNA pseudouridine synthase 2. | Nucleolar protein 58. | 0.999 |
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