STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT17397Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family. (663 aa)    
Predicted Functional Partners:
KP79_PYT06396
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
   
 0.999
SRP54
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 0.998
KP79_PYT09563
Signal recognition particle 14 kDa protein.
    
 0.997
KP79_PYT00464
Signal recognition particle 19 kDa protein.
    
 0.997
KP79_PYT22548
Signal recognition particle receptor subunit alpha.
   
 0.964
KP79_PYT21667
Signal recognition particle receptor subunit beta.
    
 
 0.935
KP79_PYT14845
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.846
KP79_PYT18267
60S ribosomal protein L39.
   
 
 0.844
KP79_PYT19800
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
    
 0.841
KP79_PYT04856
60S ribosomal protein L5-A.
    
 
 0.841
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.