Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KP79_PYT118651-aminocyclopropane-1-carboxylate synthase-like protein 1. (454 aa)    
Predicted Functional Partners:
KP79_PYT06218
Folliculin.
    
   0.536
KP79_PYT05791
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 0.529
KP79_PYT12387
Acyl-CoA synthetase family member 4.
      
 0.485
KP79_PYT18366
Uncharacterized protein.
  
 
 0.472
KP79_PYT05766
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.464
KP79_PYT23353
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).
  
 
 0.441
KP79_PYT09478
28S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.435
KP79_PYT11512
Nitrilase and fragile histidine triad fusion protein NitFhit.
  
 
 0.409
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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