Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT02171F-box/WD repeat-containing protein 7. (693 aa)    
Predicted Functional Partners:
KP79_PYT12731
F-box/WD repeat-containing protein 7.
  
 
0.923
KP79_PYT17615
F-box/WD repeat-containing protein 1A.
  
0.919
KP79_PYT08808
S-phase kinase-associated protein 2.
    
 0.918
KP79_PYT07227
F-box protein MET30.
  
  
 
0.918
KP79_PYT09244
F-box only protein 4.
    
 0.912
KP79_PYT09742
F-box/WD repeat-containing protein 7.
  
  
 
0.911
KP79_PYT15524
Ubiquitin-conjugating enzyme E2 R1; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.909
KP79_PYT24812
S-phase kinase-associated protein 1.
    
 0.880
KP79_PYT18317
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.880
KP79_PYT13372
TP53-regulating kinase.
 
      0.841
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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