STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT16370F-box/WD repeat-containing protein 8. (709 aa)    
Predicted Functional Partners:
KP79_PYT24812
S-phase kinase-associated protein 1.
    
 0.927
KP79_PYT18317
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.927
KP79_PYT05021
Cullin-1; Belongs to the cullin family.
    
 0.885
KP79_PYT13692
Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.
    
 0.745
KP79_PYT20805
Cullin-3-A; Belongs to the cullin family.
    
 0.677
KP79_PYT20855
Uncharacterized protein.
    
 0.671
KP79_PYT09244
F-box only protein 4.
    
 
 0.567
KP79_PYT11624
NEDD8-activating enzyme E1 catalytic subunit.
   
 0.551
KP79_PYT11010
39S ribosomal protein L2, mitochondrial.
    
 0.522
KP79_PYT14386
Neural cell expressed developmentally down-regulated protein 8.
    
 0.521
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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