Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT18586Uncharacterized protein. (800 aa)    
Predicted Functional Partners:
KP79_PYT06285
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1.
   
 0.654
KP79_PYT16831
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.579
KP79_PYT00087
Death domain-containing adapter protein BG4.
   
 0.564
KP79_PYT11974
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.557
KP79_PYT18709
TNF receptor-associated factor 3.
    
 0.534
KP79_PYT06117
TNF receptor-associated factor 6-B.
    
 0.534
KP79_PYT07049
Tumor necrosis factor alpha-induced protein 3.
   
  0.527
MKK7
Dual specificity mitogen-activated protein kinase kinase 7.
   
 0.516
KP79_PYT14339
Ubiquitin carboxyl-terminal hydrolase CYLD.
    
 0.507
MKK4
Dual specificity mitogen-activated protein kinase kinase 4; Belongs to the protein kinase superfamily.
    
 0.483
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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