Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT23926DnaJ-like subfamily C member 27. (268 aa)    
Predicted Functional Partners:
KP79_PYT04117
DnaJ-like subfamily C member 9.
    
 
 0.704
KP79_PYT19761
DnaJ-like subfamily C member 1.
      
 0.656
KP79_PYT24597
DnaJ-like subfamily C member 10.
   
 0.636
KP79_PYT06876
DnaJ-like subfamily C member 8.
      
 0.625
KP79_PYT24522
Golgi reassembly-stacking protein 2.
   
 0.605
KP79_PYT20942
Golgin-45.
    
 0.602
KP79_PYT08938
Cyclin-G-associated kinase.
   
 0.599
KP79_PYT15408
Leucine-rich repeat-containing protein 61.
    
  0.574
KP79_PYT11225
DnaJ-like subfamily C member 2.
      
 0.571
KP79_PYT04066
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.559
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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