STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT24409Lupus La protein-like. (425 aa)    
Predicted Functional Partners:
KP79_PYT13763
Zinc finger CCCH domain-containing protein 15.
   
    0.692
KP79_PYT10952
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
   
    0.669
KP79_PYT10088
Small nuclear ribonucleoprotein Sm D2.
   
 
 0.646
KP79_PYT07387
T-complex protein 1 subunit theta.
   
  
 0.644
KP79_PYT18922
Serine/arginine-rich splicing factor 3.
   
  
 0.643
KP79_PYT16459
Small nuclear ribonucleoprotein Sm D3.
   
   0.628
KP79_PYT24573
Nucleolar protein 58.
   
   0.609
KP79_PYT14204
Heterogeneous nuclear ribonucleoproteins C1/C2.
   
 
 0.567
KP79_PYT00169
Interleukin enhancer-binding factor 2-like.
   
  
 0.547
KP79_PYT11225
DnaJ-like subfamily C member 2.
   
    0.536
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.