STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT20049Tetratricopeptide repeat protein 14. (494 aa)    
Predicted Functional Partners:
KP79_PYT07803
Membrane-bound transcription factor site-2 protease.
      
 0.563
KP79_PYT24623
RNA-binding protein 40.
   
   0.482
KP79_PYT07379
Zinc finger C3H1 domain-containing protein.
   
   0.447
KP79_PYT07378
Uncharacterized protein.
   
   0.447
KP79_PYT19526
Splicing factor 3B subunit 1.
   
  
 0.434
KP79_PYT04182
SWI/SNF complex subunit SMARCC2.
    
 
 0.427
KP79_PYT11284
Uncharacterized protein C3orf18.
      
 0.414
KP79_PYT20286
Mitochondrial import inner membrane translocase subunit TIM14.
      
 0.414
KP79_PYT16128
Protein DGCR14.
   
 
 0.411
KP79_PYT17035
Mitoferrin-2; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.402
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.