Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT05324Paladin. (139 aa)    
Predicted Functional Partners:
KP79_PYT06072
A disintegrin and metalloproteinase with thrombospondin motifs 3.
      
 0.690
KP79_PYT17242
Uncharacterized protein.
      
 0.648
KP79_PYT22494
Carbohydrate sulfotransferase.
      
 0.623
KP79_PYT04134
Acyl-CoA-binding domain-containing protein 5.
      
 0.623
KP79_PYT19262
Pyridoxal phosphate phosphatase PHOSPHO2.
      
 0.523
KP79_PYT05325
Paladin.
 
    
0.514
KP79_PYT07230
DEP domain-containing protein 7.
      
 0.421
KP79_PYT07228
T-complex protein 11-like protein 1.
      
 0.421
KP79_PYT16228
Syntaxin; Belongs to the syntaxin family.
      
 0.414
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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