Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KP79_PYT05321 | KP79_PYT09562 | A0A210Q0E7 | A0A210QWL2 | Small G protein signaling modulator 3-like. | DNA-directed RNA polymerase II subunit RPB7. | 0.529 |
KP79_PYT05321 | KP79_PYT15886 | A0A210Q0E7 | A0A210QYZ3 | Small G protein signaling modulator 3-like. | RUN domain-containing protein. | 0.533 |
KP79_PYT05321 | KP79_PYT16337 | A0A210Q0E7 | A0A210R2I5 | Small G protein signaling modulator 3-like. | Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. | 0.431 |
KP79_PYT05321 | KP79_PYT17396 | A0A210Q0E7 | A0A210PYE1 | Small G protein signaling modulator 3-like. | Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase. | 0.527 |
KP79_PYT05321 | KP79_PYT17403 | A0A210Q0E7 | A0A210PYF7 | Small G protein signaling modulator 3-like. | LIM domain-binding protein 2. | 0.441 |
KP79_PYT09562 | KP79_PYT05321 | A0A210QWL2 | A0A210Q0E7 | DNA-directed RNA polymerase II subunit RPB7. | Small G protein signaling modulator 3-like. | 0.529 |
KP79_PYT15886 | KP79_PYT05321 | A0A210QYZ3 | A0A210Q0E7 | RUN domain-containing protein. | Small G protein signaling modulator 3-like. | 0.533 |
KP79_PYT16337 | KP79_PYT05321 | A0A210R2I5 | A0A210Q0E7 | Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. | Small G protein signaling modulator 3-like. | 0.431 |
KP79_PYT17396 | KP79_PYT05321 | A0A210PYE1 | A0A210Q0E7 | Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase. | Small G protein signaling modulator 3-like. | 0.527 |
KP79_PYT17403 | KP79_PYT05321 | A0A210PYF7 | A0A210Q0E7 | LIM domain-binding protein 2. | Small G protein signaling modulator 3-like. | 0.441 |