Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT05164U4/U6.U5 tri-snRNP-associated protein 2. (731 aa)    
Predicted Functional Partners:
KP79_PYT16847
Pre-mRNA-processing-splicing factor 8.
   
 0.975
KP79_PYT23783
U5 small nuclear ribonucleoprotein 40 kDa protein.
   
 0.946
KP79_PYT01237
U4/U6.U5 tri-snRNP-associated protein 1.
    
 0.941
KP79_PYT16859
CD2 antigen cytoplasmic tail-binding protein 2.
    
   0.925
KP79_PYT19918
ATP-dependent RNA helicase DDX23; Belongs to the DEAD box helicase family.
   
 0.915
KP79_PYT05212
U4/U6 small nuclear ribonucleoprotein Prp31.
   
 0.897
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.894
KP79_PYT08158
U2 small nuclear ribonucleoprotein A.
   
 
 0.880
KP79_PYT10088
Small nuclear ribonucleoprotein Sm D2.
    
 0.862
KP79_PYT17302
U5 small nuclear ribonucleoprotein helicase.
    
 0.806
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.