Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KP79_PYT11088Histone lysine demethylase PHF8. (928 aa)    
Predicted Functional Partners:
KP79_PYT11257
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
    
 0.937
KP79_PYT03848
Histone H3, embryonic.
    
 0.827
KP79_PYT05801
Histone H3.2.
    
 0.827
KP79_PYT05751
Histone H3; Belongs to the histone H3 family.
    
 0.827
KP79_PYT17782
AT-rich interactive domain-containing protein 5B.
    
 0.807
KP79_PYT09158
Uncharacterized protein.
    
 0.758
KP79_PYT20164
Lysine-specific demethylase 6A.
   
 0.738
KP79_PYT24812
S-phase kinase-associated protein 1.
    
 0.732
KP79_PYT18317
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.732
KP79_PYT24017
Protein argonaute-2; Belongs to the argonaute family.
   
 
 0.720
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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