STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT17662NACHT and WD repeat domain-containing protein 1. (1541 aa)    
Predicted Functional Partners:
KP79_PYT06052
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.541
KP79_PYT19889
Testis-expressed sequence 10 protein-like.
   
 0.533
KP79_PYT06603
Transcription initiation factor TFIID subunit 12.
   
 0.520
KP79_PYT02181
Transcription initiation factor TFIID subunit 9B.
    
 0.519
KP79_PYT01897
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.518
KP79_PYT13822
Transcription initiation factor TFIID subunit 4.
    
 0.514
KP79_PYT08030
Transcription initiation factor TFIID subunit 2.
    
 0.512
KP79_PYT13993
Cleavage and polyadenylation specificity factor subunit 1.
    
 0.507
KP79_PYT02234
Intraflagellar transport protein 140.
    
 0.506
KP79_PYT12867
Transcription initiation factor TFIID subunit 1.
    
 0.505
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.