STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT18101Intermediate filament tail domain-containing protein 1. (1152 aa)    
Predicted Functional Partners:
KP79_PYT09935
Barrier-to-autointegration factor A.
   
 0.715
KP79_PYT11085
Emerin-like 1.
    
 0.670
KP79_PYT11466
Inner nuclear membrane protein Man1.
    
 0.635
KP79_PYT06177
SUN domain-containing protein 1.
    
 0.553
KP79_PYT23829
WD repeat-containing protein 48.
      
 0.544
KP79_PYT14418
RNA-binding protein 39.
   
 0.499
KP79_PYT09398
Nesprin-1.
    
 0.437
KP79_PYT18158
Rho GTPase-activating protein 39.
    
  0.434
KP79_PYT19310
Sentrin-specific protease 1.
    
 0.431
KP79_PYT11479
Ras-like GTP-binding protein RHO.
   
 0.412
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.