STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT15178DNA polymerase subunit gamma-1. (1163 aa)    
Predicted Functional Partners:
KP79_PYT05105
DNA polymerase subunit gamma-2, mitochondrial.
   
 
 0.965
KP79_PYT18216
Single-stranded DNA-binding protein, mitochondrial.
   
 
 0.749
KP79_PYT15993
Twinkle protein, mitochondrial.
   
  
 0.726
KP79_PYT19701
Glycine--tRNA ligase.
   
 
 0.720
KP79_PYT05649
Transcription factor A, mitochondrial.
    
 
 0.708
KP79_PYT21812
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
   
  
 0.702
KP79_PYT09538
Fanconi anemia group M protein.
   
 
 0.677
KP79_PYT21814
Triosephosphate isomerase.
    
 0.675
KP79_PYT16219
Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family.
    
 
 0.640
KP79_PYT02068
Endonuclease 8-like 3.
  
  
 0.615
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.