STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT18795DDB1-and CUL4-associated factor 7. (365 aa)    
Predicted Functional Partners:
KP79_PYT21946
Dual specificity tyrosine-phosphorylation-regulated kinase 1A.
   
 
 0.945
KP79_PYT18047
DNA damage-binding protein 1.
    
 0.909
KP79_PYT20767
Cullin-4A.
    
 0.883
KP79_PYT10380
Denticleless protein-like.
     
 0.785
KP79_PYT07913
Histone-binding protein RBBP7.
     
 0.755
KP79_PYT12880
V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
 
      0.748
KP79_PYT25928
DNA excision repair protein ERCC-8.
     
 0.730
KP79_PYT08600
DNA excision repair protein ERCC-8.
     
 0.730
KP79_PYT20724
WD repeat-containing protein 73.
     
 0.722
KP79_PYT13633
DDB1-and CUL4-associated factor 11.
    
 0.711
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.