STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT18794PAX-interacting protein 1. (927 aa)    
Predicted Functional Partners:
KP79_PYT15545
Tumor suppressor p53-binding protein 1.
    
 0.907
KP79_PYT08429
Structural maintenance of chromosomes protein 6.
   
 
 0.880
KP79_PYT16840
Nibrin.
    
 0.820
KP79_PYT22093
Retinoblastoma-binding protein 5.
   
 0.804
KP79_PYT08273
Ankyrin repeat domain-containing protein 32.
   
 0.795
KP79_PYT05428
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.772
KP79_PYT20164
Lysine-specific demethylase 6A.
    
 0.767
KP79_PYT06295
Set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.765
KP79_PYT09650
E3 ubiquitin-protein ligase RNF8.
    
 0.753
KP79_PYT04468
DNA topoisomerase 2-binding protein 1.
   
 
0.752
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.