STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT10067GDP-D-glucose phosphorylase 1. (386 aa)    
Predicted Functional Partners:
KP79_PYT15844
Gametogenetin-binding protein 2.
      
 0.635
KP79_PYT07075
S-adenosylmethionine decarboxylase proenzyme.
      
 0.552
KP79_PYT07133
28S ribosomal protein S6, mitochondrial.
    
 
 0.549
KP79_PYT20338
Mannose-6-phosphate isomerase.
      
 0.438
KP79_PYT00688
L-galactose dehydrogenase.
      
 0.414
KP79_PYT19549
L-galactose dehydrogenase.
      
 0.414
KP79_PYT15140
28S ribosomal protein S29, mitochondrial.
    
   0.407
KP79_PYT11771
TBC1 domain family member 22B.
    
   0.407
KP79_PYT13570
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
   0.407
KP79_PYT21413
39S ribosomal protein L47, mitochondrial.
    
   0.407
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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