STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT24170E3 ubiquitin-protein ligase NRDP1. (315 aa)    
Predicted Functional Partners:
KP79_PYT24484
Receptor protein-tyrosine kinase.
    
 0.986
KP79_PYT22640
Ubiquitin carboxyl-terminal hydrolase 8; Belongs to the peptidase C19 family.
    
 0.949
KP79_PYT07287
Ubiquitin carboxyl-terminal hydrolase 25; Belongs to the peptidase C19 family.
    
 0.949
KP79_PYT05932
E3 ubiquitin-protein ligase.
    
 0.909
KP79_PYT14305
E3 ubiquitin-protein ligase.
    
 0.906
KP79_PYT18709
TNF receptor-associated factor 3.
    
 
0.902
KP79_PYT06117
TNF receptor-associated factor 6-B.
    
 
0.902
KP79_PYT10309
Baculoviral IAP repeat-containing protein 6.
    
 0.789
KP79_PYT21967
Ubiquitin carboxyl-terminal hydrolase.
    
 0.753
KP79_PYT06025
AN1-type zinc finger protein 4.
    
 0.601
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.