STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT08489Niemann-Pick C1 protein. (1005 aa)    
Predicted Functional Partners:
KP79_PYT20013
Epididymal secretory protein E1.
    
 0.954
KP79_PYT20012
Epididymal secretory protein E1.
    
 0.954
KP79_PYT20014
Epididymal secretory protein E1.
    
 0.954
KP79_PYT09991
Epididymal secretory protein E1.
    
 0.954
KP79_PYT09419
Epididymal secretory protein E1.
    
 0.954
KP79_PYT09160
Patched domain-containing protein 3.
  
  
 
0.905
KP79_PYT23882
Niemann-Pick C1 protein.
     
 
0.900
KP79_PYT13302
Sterol regulatory element-binding protein 1.
   
 0.816
KP79_PYT19333
Insulin-induced gene 2 protein.
   
 0.631
KP79_PYT14495
Membrane-bound transcription factor site-1 protease.
   
 
 0.434
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.