STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT10187Golgin subfamily A member 5. (764 aa)    
Predicted Functional Partners:
KP79_PYT13737
Conserved oligomeric Golgi complex subunit 7.
     
 0.663
KP79_PYT09930
Thyroid receptor-interacting protein 11.
   
  
 0.601
KP79_PYT04374
SNARE-associated protein Snapin.
      
 0.569
KP79_PYT03138
Vacuolar protein sorting-associated protein 33B; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.567
KP79_PYT22748
Centrin-3.
      
 0.567
KP79_PYT00456
Vacuolar protein sorting-associated protein 33B; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.567
KP79_PYT15887
Small G protein signaling modulator 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.567
KP79_PYT10664
FHA domain-containing protein.
      
 0.557
KP79_PYT20942
Golgin-45.
   
  
 0.554
KP79_PYT24522
Golgi reassembly-stacking protein 2.
   
  
 0.552
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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