STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT17822Protein RMD5-like A. (388 aa)    
Predicted Functional Partners:
KP79_PYT18157
Glucose-induced degradation protein 8-like.
  
 
 
 0.968
KP79_PYT14431
Ran-binding protein 9.
  
 
 0.965
KP79_PYT10348
WD repeat-containing protein 26.
  
 
 0.875
KP79_PYT05714
Glucose-induced degradation protein 4-like.
    
 
 0.850
KP79_PYT24843
WD repeat-containing protein 26.
   
 
 0.843
KP79_PYT17983
SPRY domain-containing protein 3.
   
 
 0.793
KP79_PYT07313
B30.2/SPRY domain-containing protein.
   
 
 0.793
KP79_PYT11382
Muskelin.
    
 
 0.759
KP79_PYT10248
Protein yippee-like; Belongs to the yippee family.
    
 
 0.646
KP79_PYT16238
Protein yippee-like; Belongs to the yippee family.
    
 
 0.646
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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