STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT08010Integrin beta-1-binding protein 1. (178 aa)    
Predicted Functional Partners:
KP79_PYT03159
FERM domain-containing protein 8.
    
 
 0.896
KP79_PYT20354
Programmed cell death protein 10.
      
 0.622
KP79_PYT15341
Galectin.
      
 0.553
KP79_PYT03547
Laminin subunit gamma-1.
      
 0.468
KP79_PYT24564
Mitogen-activated protein kinase kinase kinase 2.
  
   
 0.465
KP79_PYT12059
Ras-related protein Rap-1b.
      
 0.443
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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