STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT24725Complement C1q-like protein 4. (178 aa)    
Predicted Functional Partners:
KP79_PYT19592
Complement C1q tumor necrosis factor-related protein 5.
  
     0.531
KP79_PYT03483
Caprin-2.
  
     0.527
KP79_PYT01667
Heavy metal-binding protein HIP.
  
     0.526
KP79_PYT22823
Complement C1q-like protein 2.
  
     0.511
KP79_PYT16836
Complement C1q tumor necrosis factor-related protein 5.
  
     0.499
KP79_PYT14015
Caprin-2.
  
     0.486
KP79_PYT08854
Complement C1q-like protein 4.
  
     0.475
KP79_PYT25124
Collagen alpha-1(VIII) chain.
  
     0.471
KP79_PYT16837
Collagen alpha-1(X) chain.
  
     0.468
KP79_PYT19636
Complement C1q-like protein 2.
  
     0.457
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.