STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT23587SUMO-specific isopeptidase USPL1. (1019 aa)    
Predicted Functional Partners:
KP79_PYT10277
Protein unc-79-like.
    
 0.741
KP79_PYT12942
Small ubiquitin-related modifier.
    
 0.640
KP79_PYT11014
Uncharacterized protein.
    
 0.571
KP79_PYT05673
Desumoylating isopeptidase 1.
      
 0.566
KP79_PYT19730
NMDA receptor-regulated protein 2.
   
  
 0.546
KP79_PYT12771
RANBP2-like and GRIP domain-containing protein 8.
   
 0.534
KP79_PYT20164
Lysine-specific demethylase 6A.
   
 0.474
KP79_PYT21519
Uncharacterized protein.
    
 0.464
KP79_PYT00438
S-antigen protein.
    
 0.464
KP79_PYT06307
Ubiquitin carboxyl-terminal hydrolase.
      
 0.457
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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