STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT17175Lysine-specific demethylase 3B. (3082 aa)    
Predicted Functional Partners:
KP79_PYT16023
Lysine-specific demethylase 2B.
   
 
 0.771
KP79_PYT11088
Histone lysine demethylase PHF8.
   
 
 0.579
KP79_PYT09060
Lysine-specific demethylase 4B.
     
 0.562
KP79_PYT03848
Histone H3, embryonic.
    
 0.559
KP79_PYT05801
Histone H3.2.
    
 0.559
KP79_PYT05751
Histone H3; Belongs to the histone H3 family.
    
 0.559
KP79_PYT03553
HSPB1-associated protein 1.
      
 0.543
KP79_PYT15698
Histone-lysine N-methyltransferase SETD1B-A.
    
 
 0.524
KP79_PYT14502
Lysine-specific demethylase 8.
      
 0.520
KP79_PYT07578
Probable lysine-specific histone demethylase 1; Probable histone demethylase that specifically demethylates 'Lys-4' of histone H3, a specific tag for epigenetic transcriptional activation, thereby acting as a corepressor. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Demethylates both mono- and di-methylated 'Lys-4' of histone H3.
     
 0.505
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.