STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT05932E3 ubiquitin-protein ligase. (757 aa)    
Predicted Functional Partners:
KP79_PYT23068
Mothers against decapentaplegic homolog.
    
 0.997
KP79_PYT24324
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.971
KP79_PYT24484
Receptor protein-tyrosine kinase.
    
 0.961
KP79_PYT18709
TNF receptor-associated factor 3.
    
 0.928
KP79_PYT06117
TNF receptor-associated factor 6-B.
    
 0.928
KP79_PYT24170
E3 ubiquitin-protein ligase NRDP1.
    
 0.909
KP79_PYT14305
E3 ubiquitin-protein ligase.
  
  
0.905
KP79_PYT22635
Mothers against decapentaplegic homolog.
   
 0.889
KP79_PYT08802
Protein patched-like 1.
    
 0.821
KP79_PYT14156
Integrator complex subunit 8.
    
 0.820
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.