STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT07264L-sorbose 1-dehydrogenase. (427 aa)    
Predicted Functional Partners:
KP79_PYT09310
Intraflagellar transport protein 52-like.
    
 0.713
KP79_PYT05520
Tetratricopeptide repeat protein 26.
    
 0.703
KP79_PYT05103
Tetratricopeptide repeat protein 30A.
    
 0.701
KP79_PYT20193
Intraflagellar transport protein 81-like.
    
 0.695
KP79_PYT07658
Intraflagellar transport protein 88-like.
    
 0.690
KP79_PYT00482
Intraflagellar transport protein 57-like.
    
 0.688
KP79_PYT08953
Intraflagellar transport protein 172.
    
 0.683
KP79_PYT20631
Intraflagellar transport protein 80-like.
    
 0.681
KP79_PYT05858
Clusterin-associated protein 1.
    
 0.676
TRAF3IP1
TRAF3-interacting protein 1.
    
 0.655
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.