STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT07277IST1-like. (367 aa)    
Predicted Functional Partners:
KP79_PYT07699
Charged multivesicular body protein 1b.
    
 
 0.991
KP79_PYT07246
Vacuolar protein sorting-associated protein VTA1-like.
   
 
 0.966
KP79_PYT04785
Charged multivesicular body protein 5.
    
 
 0.956
KP79_PYT07871
Charged multivesicular body protein 2a.
    
 0.951
KP79_PYT17178
Charged multivesicular body protein 3.
    
 0.949
KP79_PYT05222
Charged multivesicular body protein 6.
    
 0.923
KP79_PYT17273
Charged multivesicular body protein 7.
    
 0.907
KP79_PYT13740
Charged multivesicular body protein 1a.
    
 
 0.905
KP79_PYT14366
Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.
   
 0.898
KP79_PYT14501
Vacuolar protein sorting-associated protein 4A; Belongs to the AAA ATPase family.
   
 0.898
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.