STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT04318FAD-dependent oxidoreductase domain-containing protein 1. (509 aa)    
Predicted Functional Partners:
KP79_PYT04847
Valine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.745
KP79_PYT22268
Sulfite oxidase, mitochondrial.
      
 0.692
KP79_PYT24120
Tyrosine--tRNA ligase.
   
  
 0.683
KP79_PYT13692
Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.
   
  
 0.667
KP79_PYT09473
ATP synthase subunit s-like protein.
   
  
 0.597
KP79_PYT10393
Complex I intermediate-associated protein 30, mitochondrial.
   
  
 0.586
KP79_PYT20244
Very long-chain specific acyl-CoA dehydrogenase, mitochondrial.
   
 
 0.584
KP79_PYT06010
Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial.
   
  
 0.580
KP79_PYT13362
NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6.
   
  
 0.573
KP79_PYT18508
3-ketoacyl-CoA thiolase, mitochondrial; Belongs to the thiolase-like superfamily. Thiolase family.
      
 0.570
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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