STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT12772Malate synthase. (585 aa)    
Predicted Functional Partners:
KP79_PYT19632
Citrate synthase; Belongs to the citrate synthase family.
  
 0.999
KP79_PYT11353
Ribonuclease P protein subunit p14.
  
  
 0.984
KP79_PYT09975
Hydroxyacyl-thioester dehydratase type 2, mitochondrial.
  
  
 0.984
KP79_PYT23496
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.977
KP79_PYT21307
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.976
KP79_PYT05309
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.975
KP79_PYT23269
Cytoplasmic aconitate hydratase; Belongs to the aconitase/IPM isomerase family.
  
 0.974
KP79_PYT00534
Malate dehydrogenase.
  
 0.964
KP79_PYT19094
RING-type domain-containing protein.
  
 0.964
KP79_PYT25863
Malic enzyme, hydrogenosomal.
  
 
 0.963
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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